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Biology · Periodization of Ontogenesis

Histogenesis and organogenesis

Histogenesis and organogenesis are the processes of tissue and organ formation from germ layers. The initial stage of organogenesis is neurulation, during which the embryo forms the axial organ complex: the neural tube, notochord, and primitive gut.

Organ originThe formation of most organs involves multiple germ layers simultaneously.
NeurulationThe developmental stage at which the axial complex is formed. The embryo is called a neurula.
NotochordThe axial organ of chordates, which forms from the dorsal endoderm.
InductionThe formation of the neural tube is initiated by the notochord and mesoderm.
3 min readFor medical studentsUpdated 09/24/2026
Material prepared by WhiteCoat Pro editorial team based on platform study guidesReviewed by medical editor: Aulov A. A., general practitioner · 09/24/2026

Neurulation and Axial Complex

The initial stage of organogenesis is called neurulation, and the embryo at this stage is called a neurula. During this period, the axial organ complex characteristic of all chordates is formed, which proves their complete homology and evolutionary continuity.

The complex includes three main structures:

  1. Notochord (chorda) — develops from the dorsal endoderm.
  2. Intestinal tube — forms from the endoderm and lies directly beneath the notochord.
  3. Neural tube — forms from the ectoderm on the dorsal side of the embryo. This process is induced by the notochord and mesoderm. First, a neural groove appears, the edges of which fuse into a tube with an internal cavity called the neurocoel. In craniates, this tube differentiates into the brain and spinal cord.

Mesodermal differentiation

The mesoderm is located on either side of the notochord, between the surface ectoderm and endoderm. During development, the unified mesodermal sheet dynamically divides into three primordia:

  • Dorsal part (somites). These are paired segmented structures that develop in a craniocaudal direction. Somites differentiate into:
  • Sclerotomes (ventromedial part): transform into secondary mesenchyme, migrate to the notochord, and form the vertebrae, ribs, and scapulae.
  • Myotomes (inner dorsolateral part): give rise to striated skeletal muscles.
  • Dermatomes (outer dorsolateral part): form the inner layer of the skin (dermis).
  • Intermediate mesoderm (nephrotome and gonotome). These are segmented stalks connecting the somites to the lateral plate. They give rise to the excretory and reproductive organs.
  • Ventral part (lateral plate). A thin unsegmented layer of cells splitting into two leaves, between which a secondary body cavity arises — the coelom (lined with mesothelium). The inner visceral leaf lies adjacent to the entoderm and gives rise to the myocardium, lung parenchyma, and mesentery. The outer parietal leaf lies adjacent to the ectoderm and forms the outer layers of the serous membranes (peritoneum, pleura, pericardium).
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Germ layer derivatives

Although the classification of organs by germ layers is conventional (many organs have a mixed origin), each layer gives rise to specific tissues.

Ectoderm:

  • Neural tube (brain and spinal cord).
  • Skin epidermis and its derivatives (nails, feathers, hair, mammary glands).
  • Organs of vision, hearing, and smell.
  • Tooth enamel, oral cavity epithelium, anterior and posterior sections of the gut.
  • Posterior pituitary, pineal gland.

Mesoderm:

  • Dermis.
  • Skeleton, muscles, connective tissue.
  • Circulatory, lymphatic, excretory, and reproductive systems.
  • Serous membranes (coelom, peritoneum, etc.).

Endoderm:

  • Epithelium of the midgut and stomach, tongue, oral and pharyngeal cavities.
  • Digestive glands (liver, pancreas).
  • Epithelium of the lungs and respiratory tract.
  • Anterior and intermediate lobes of the pituitary gland, thyroid and parathyroid glands, thymus.
How to memorize

To memorize somite differentiation, use the acronym SMD: Sclerotome — Skeleton, Myotome — Muscles, Dermatome — Dermis.

Class and exam questions

Which germ layer forms the neural tube?

It forms from the ectoderm on the dorsal side of the embryo. The remaining ectoderm forms the surface epithelium and its derivatives.

What is the coelom and how does it form?

The coelom is the secondary body cavity. It forms as a space when the ventral mesoderm (lateral plate) splits into the inner visceral and outer parietal leaves.

Is it true that each organ consists of only one germ layer?

No, the classification of organs by germ layers is conventional, as the formation of most organs involves multiple layers simultaneously.

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What else to study on this topic

  • Induction mechanisms: how the notochord and mesoderm influence neural tube development.
  • Migration of sclerotome cells and the formation of secondary mesenchyme.
  • Differentiation of brain and spinal cord regions in craniates.
  • Formation and topography of the mesothelium in serous cavities.

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