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Biochemistry · Enzymology

Flavin coenzymes

Flavin coenzymes are essential non-protein components of enzymes that catalyze redox reactions within the cell. This group includes flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN), which facilitate the transfer of electrons and protons from the substrate.

VitaminRiboflavin (vitamin B2)
EnzymesOxidoreductases (subclass: dehydrogenases)
Transfer2 protons and 2 electrons
StructureIsoalloxazine ring
3 min readFor medical studentsUpdated 09/24/2026
Material prepared by WhiteCoat Pro editorial team based on platform study guidesReviewed by medical editor: Aulov A. A., general practitioner · 09/24/2026

Origin and role in enzymatic reactions

The structure of flavin coenzymes is based on a precursor vitamin — riboflavin, universally known as vitamin $B_2$. Two active forms are synthesized from it in the body: flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN).

These coenzymes are an integral part of enzymes belonging to the oxidoreductase class. More specifically, they function within the dehydrogenase subclass — enzymes that specialize in removing hydrogen atoms from various chemical substrates. Without FAD and FMN, biological oxidation processes in many metabolic pathways would simply be impossible.

Mechanism of action: how substrate oxidation occurs

The primary function of flavin coenzymes is direct participation in substrate oxidation. The process follows a strictly defined scenario:

  1. The dehydrogenase enzyme binds to the substrate that needs to be oxidized.
  2. During the chemical reaction, exactly two protons ($2H^+$) and two electrons ($2e^-$) are cleaved from the substrate molecule.
  3. A key feature of FAD and FMN is that all of these cleaved particles (both protons and both electrons) attach directly to the coenzyme itself.

Thus, the coenzyme acts as a universal acceptor, taking on the hydrogen equivalent and converting the substrate into an oxidized state.

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Chemical structure: oxidized and reduced forms

The working, or "active," part of the flavin coenzyme molecule is the isoalloxazine ring. This is where the main chemical events unfold during the transfer of protons and electrons.

  • Oxidized form: In its initial state (denoted as FAD or FMN), the central ring of the isoalloxazine structure has double bonds at the nitrogen atoms. This is a state ready to accept hydrogen.
  • Reduced form: When the coenzyme takes $2H^+$ and $2e^-$ from the substrate, the ring is reduced. Hydrogen atoms attach to two nitrogen atoms in the central part of the isoalloxazine ring. As a result of this attachment, the double bonds at the nitrogen atoms break, forming reduced molecules designated as $FADH_2$ and $FMNH_2$.

Briefly: answers to topical questions

In which specific metabolic pathways do flavin dehydrogenases participate?

Flavin dehydrogenases participate in the tricarboxylic acid cycle (Krebs cycle) and the oxidative breakdown of energy substrates.

  • Krebs cycle — FAD-dependent succinate dehydrogenase completes the oxidative breakdown of glucose and fatty acids.
  • Electron transport chain — enzymes transfer reducing equivalents to coenzyme Q (ubiquinone) from primary hydrogen donors (succinate, acyl-CoA, α-glycerophosphate).

Which complexes of the mitochondrial respiratory chain contain flavin coenzymes?

Flavin coenzymes are part of the high-molecular-weight protein complexes of the mitochondrial respiratory chain.

  • Complex I (NADH dehydrogenase) — contains the flavin mononucleotide (FMN) coenzyme.
  • Complex II (Succinate dehydrogenase) — is FAD-dependent and contains flavin adenine dinucleotide (FAD).

What clinical symptoms are characteristic of vitamin B2 avitaminosis and hypovitaminosis?

Vitamin B2 (riboflavin) deficiency manifests as lesions of the oral mucosa and lips: cheilosis, cheilitis, angular stomatitis, as well as decreased performance.

For hypovitaminosis as a general condition, sources also indicate non-specific symptoms: decreased appetite and rapid fatigue.

What is the energy yield (in ATP molecules) from the oxidation of a single FADH2 molecule in the electron transport chain?

The energy yield from the oxidation of a single FADH2 molecule in the electron transport chain is 2 ATP molecules. This value is based on classical P/O ratios used to calculate ATP synthesis in aerobic metabolism.

How to memorize

To remember which particles FAD accepts, use the "Rule of Twos": vitamin B(2) yields a coenzyme that accepts (2) protons and (2) electrons at (2) nitrogen atoms.

Class and exam questions

Which vitamin is the precursor of FAD and FMN?

The precursor of flavin coenzymes is riboflavin, also known as vitamin $B_2$.

To which class of enzymes do enzymes utilizing flavin coenzymes belong?

They function as part of the oxidoreductase class, specifically within their dehydrogenase subclass.

How many protons and electrons does FAD accept upon reduction?

Exactly 2 protons ($2H^+$) and 2 electrons ($2e^-$) are cleaved from the oxidized substrate and attached to the coenzyme.

What happens to the isoalloxazine ring upon transition to the FADH2 form?

Hydrogen atoms attach to two nitrogen atoms in the central ring, accompanied by the breakage of double bonds.

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What else to study on this topic

  • Detailed chemical structure of flavin adenine dinucleotide
  • Structural differences between FAD and FMN
  • Specific substrates for flavin dehydrogenases
  • The role of nicotinamide coenzymes compared to flavin coenzymes

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