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Chemistry · Chapter 14. Theoretical Foundations of Organic Chemistry

Classification of organic compounds

The presence of functional groups in molecules is the main criterion for dividing organic substances into classes. Additionally, the structure of the carbon skeleton and molecular mass are taken into account. This system makes it possible to organize the diversity of chemical compounds and understand the patterns of their properties.

Main featureThe defining factor is the nature and the very presence of functional groups in the molecule.
HeterofunctionalityMolecules can combine features of different classes (as in carbohydrates and amino acids).
Skeleton structureThe carbon backbone can be non-cyclic (aliphatic) or closed into rings.
NomenclatureClass names are strictly tied to specific suffixes and prefixes.
5 min readFor medical studentsUpdated 09/24/2026
Material prepared by WhiteCoat Pro editorial team based on platform study guidesReviewed by medical editor: Aulov A. A., general practitioner · 09/24/2026

Basic separation principles

The systematization of the vast array of organic substances is based on several key criteria. The most important of these is functional groups. They determine the specific chemical behavior of the molecule.

However, within each major class, there is an additional division. First, the structure of the carbon skeleton is evaluated: molecules can be arranged in open chains (so-called non-cyclic or aliphatic compounds) or closed into rings (cyclic). Special heterocyclic structures are also distinguished, where the functional group is embedded directly into the carbon ring.

Secondly, substances are differentiated by their molecular mass, being divided into low-molecular-weight and high-molecular-weight compounds.

In addition to compounds containing only basic organogens, there are extensive classes of substances in nature containing other non-metals. Their composition may include sulfur, phosphorus, boron, or silicon. Organometallic compounds, which contain carbon-metal bonds, occupy a distinct and important niche. However, within the scope of this material, the main focus is on hydrocarbons, as well as oxygen- and nitrogen-containing compounds.

Hydrocarbons and halogen derivatives

This group consists exclusively of carbon and hydrogen atoms. Differences between subclasses lie in the types of chemical bonds and the presence of rings.

  • Alkanes: Saturated structures containing only single bonds between carbons (C–C) and hydrogen (C–H). In names, they receive the suffix -ane.
  • Alkenes: Distinguished by the presence of one C=C double bond in the skeleton. Indicated by the suffix -ene.
  • Alkynes: Contain one C≡C triple bond and receive the suffix -yne.
  • Dienes: Characterized by the presence of two double bonds at once, which is reflected by the suffix -diene.
  • Arenes (aromatic hydrocarbons): The basis of these molecules is an aromatic ring (benzene ring). The name "benzene" often serves as the basis for naming the parent structure.

If halogen atoms (fluorine, chlorine, bromine, or iodine) are introduced into the hydrocarbon skeleton, halogen derivatives are formed. Their functional groups (–F, –Cl, –Br, –I) are designated in nomenclature by the corresponding prefixes: fluoro-, chloro-, bromo-, iodo-.

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Oxygen-containing compounds

The introduction of oxygen atoms into the hydrocarbon skeleton gives rise to many new classes with diverse physical and chemical properties.

ClassFunctional group characteristicsNomenclature elements
AlcoholsHydroxyl (–OH) at an $sp^3$-hybridized C atomSuffix -ol, prefix hydroxy-
PhenolsHydroxyl (–OH) attached directly to an areneBase name "phenol", prefix hydroxy-
AldehydesCarbonyl with hydrogen (–CH=O)Suffix -al, prefix oxy-
KetonesCarbonyl (C=O) between two carbon atomsSuffix -one, prefix oxy-
AcidsCarboxyl group (–COOH)Suffix -oic acid, prefix carboxy-

In addition to those listed, fats and ethers are classified as oxygen-containing. Ethers represent an oxygen bridge between two radicals (R–O–R) and are named using prefixes that depend on the radical (e.g., methoxy-, ethoxy-). Esters contain the –COOR ester group and are named according to strict rules — like salts of the corresponding carboxylic acids.

Nitrogen-containing and heterofunctional compounds

Nitrogen forms two main groups of substances considered in the basic classification:

  1. Amines: Derivatives with an amino group. It can be primary (–NH2), secondary (–NH–), or tertiary (nitrogen without hydrogens bonded to three substituents). They are characterized by the prefix amino- and the suffix -amine.
  2. Nitro compounds: Contain a nitro group (–NO2), which is always designated in names by the prefix nitro-.

A special and most complex category is heterofunctional compounds. They combine the features of several different classes at once, most often combining elements of oxygen- and nitrogen-containing groups. This broad category includes molecules of vital importance to biochemistry: amino acids, carbohydrates, and various heterocyclic compounds that form the basis for constructing proteins and nucleic acids.

Briefly: answers to topical questions

Which classes of bioorganic compounds are classified as heterofunctional?

Heterofunctional bioorganic compounds include carbohydrates, amino acids, and heterocyclic compounds. They combine the features of various groups, often including elements of oxygen- and nitrogen-containing substances. They also include heterofunctional acids, which are classified by structure into:

  • Keto acids — contain a keto group and a carboxyl group.
  • Alcohol acids (hydroxy acids) — contain a hydroxyl and a carboxyl group.

These compounds play an important role in biological processes, such as the oxidation of glucose in cells.

Which functional groups must necessarily be present in the structure of amino acids?

The structure of amino acids necessarily contains two functional groups that determine their amphoteric chemical properties. These include:

  • Amino group ($-NH_2$) — determines the basic properties of the compound.
  • Carboxyl group ($-COOH$) — is responsible for acidic properties.

The presence of these groups allows amino acids to create an acidic or alkaline medium in solutions, depending on their quantitative ratio. During internal neutralization, a zwitterion is formed, but the acidic and basic groups retain their chemical activity.

How are the names of esters formed according to the IUPAC systematic nomenclature?

According to the systematic nomenclature, the names of esters are formed by analogy with the names of salts of the corresponding acids. The rules for compiling the name include the following steps:

  • First, the hydrocarbon radical of the alcohol is indicated as a prefix.
  • Then the name of the acid anion is added.

For example, the substance $HCOOC_3H_7$ is called propyl formate, where "propyl" denotes the alcohol radical and "formate" denotes the formic acid anion.

What are the main types of isomerism in organic compounds?

The sources indicate the following types of isomerism:

  • Position isomerism of acyl radicals — possible in fat molecules when two or three different acid residues are present.
  • Structural isomerism of radicals — different structure of the carbon skeleton with the same total number of carbon and hydrogen atoms.
  • Interclass isomerism — acids and esters with the same number of carbon atoms are isomers.
  • Enantiomerism (optical isomerism) — stereoisomers that relate to each other as an object and its mirror image.
How to memorize

To memorize hydrocarbon suffixes by increasing bond multiplicity, use the vowels A-E-I (alkane — single, alkene — double, alkyne — triple).

Class and exam questions

How do alcohols differ from phenols in structure?

In alcohols, the hydroxyl group (–OH) is attached to a carbon atom in $sp^3$ hybridization, whereas in phenols it is directly bonded to the aromatic (benzene) ring.

What are heterocyclic compounds?

This is a specific class of cyclic organic substances in which the functional group (containing non-carbon atoms) is incorporated directly into the ring itself alongside carbon atoms.

How are the names of esters formed?

According to the rules of organic nomenclature, esters are named analogously to salts derived from the corresponding carboxylic acids.

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What else to study on this topic

  • Structural and isomerism features of heterofunctional compounds
  • Organometallic compounds and their role in synthesis
  • Specifics of $sp^3$ hybridization in alcohol molecules
  • Organic molecules containing sulfur, silicon, and phosphorus
  • IUPAC rules for complex carbon skeletons

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