Log in
Chemistry · Chapter 18. Major Classes of Bioorganic Compounds

Physicochemical properties of proteins

The physicochemical properties of proteins are determined by their amino acid composition, primary sequence, and spatial configuration. The main characteristics are solubility, tendency to denaturation, amphotericity, and the ability to undergo specific chemical reactions.

DeterminantsProperties depend on composition, primary structure, and spatial folding.
EnzymesLose activity due to thermal denaturation already at 40–50 °C.
AmphotericityMolecules contain both acidic (-COOH) and basic (-NH2) groups.
ToxicityHeavy metals block sulfur atoms, disrupting protein functions.
5 min readFor medical studentsUpdated 09/24/2026
Material prepared by WhiteCoat Pro editorial team based on platform study guidesReviewed by medical editor: Aulov A. A., general practitioner · 09/24/2026

Solubility and effect of salts

Based on their ability to dissolve in water, proteins are divided into two polar groups. For example, egg albumin and hemoglobin are highly soluble, whereas the fibrous protein of hair (keratin) is completely insoluble.

The degree of solubility directly depends on the number of hydrophilic (polar) radicals located on the surface of the protein globule or fibril. The more of them there are, the easier the protein is retained in the aqueous phase. The presence of salts in solution can sharply decrease the solubility of protein molecules — this process is called salting-out and leads to protein precipitation.

Denaturation and thermal stability

Upon thermal exposure, the protein molecule undergoes denaturation. High temperature causes the rearrangement of tertiary and quaternary structures. The initial conformation of the globule is destroyed, and new, atypical bonds arise between amino acid radicals.

As a result, the protein can turn into a dense cross-linked polymer, completely losing the properties of a liquid solution (a clear example is boiling an egg). This process is especially critical for enzyme proteins, which irreversibly lose their catalytic activity within a narrow temperature range of 40–50 °C.

Test your knowledge on this topicTasks from the "Chemistry" course bank — instant answers and explanations.

Amphotericity and enzyme self-regulation

Proteins are amphoteric polyelectrolytes. This means that they carry both acidic ($-COOH$) and basic ($-NH_2$) groups located at the ends of the polypeptide chain and in the radicals of amino acid residues. Because of this, the number and sign of charges on the molecule strictly depend on the medium pH, which critically affects the biochemical activity of enzymes.

The tertiary structure of a protein is quite labile and easily changes upon contact with ions or small molecules. The feedback self-regulation mechanism is based on this:

  • The accumulating reaction product binds to the enzyme.
  • The spatial conformation of the enzyme changes, and it transitions into an inactive state.
  • Product production stops until its concentration drops to normal.

Chemical color reactions

For qualitative analysis and proving the presence of protein, specific color reactions are used, determined by the chemical structure of the molecule:

  1. Biuret test (with copper salts). Proceeds exclusively in an alkaline medium. Copper ions attach to the peptide group, causing a bright violet coloration of the solution.
  2. Xanthoproteic test (with nitric acid). Based on the nitration of aromatic radicals of amino acids. As a result, intensely yellow products are formed (similarly, a yellow spot appears on the skin upon contact with $HNO_3$).
  3. Interaction with heavy metals. Reagents containing silver, mercury, lead, or thallium ions are used. Metals bind tightly to sulfur within the amino acid cysteine. In the case of silver nitrate (lunar caustic), a brown spot is formed.

Note: The mechanism of heavy metal toxicity is based precisely on their affinity for sulfur atoms. By binding to them, metals distort the properties of the molecule and irreversibly disrupt protein functions in the body.

Briefly: answers to topical questions

What factors cause protein denaturation?

Protein denaturation is caused by various physical and chemical factors.

  • Physical factors — high temperature (heating above 60 °C), ultraviolet and microwave radiation, ultrasound, mechanical impact, and radiation.
  • Chemical factors — change in pH (acids and alkalis), heavy metal salts, organic solvents (alcohol, phenol, chloramine), detergents, alkaloids, and toxins (urea).

These agents lead to the rupture of weak bonds stabilizing the spatial structure of the protein molecule.

How does protein salting-out differ from denaturation?

The main difference lies in the reversibility of the process.

CharacteristicSalting-outDenaturation
ReversibilityReversible process: after adding solvent, the protein returns to solutionWith partial destruction of conformation, renaturation is possible; upon destruction of primary structure, denaturation is irreversible
Acting factorAddition of salts (electrolytes) that decrease protein solubilityTemperature, pH change, heavy metal salts, organic solvents, and other denaturing factors
Effect on structureSources indicate the reversibility of salting-out, but do not specify structural changes in this contextDestruction of secondary, tertiary, and quaternary conformations without breaking peptide bonds

Which specific amino acids are detected using the xanthoproteic test?

The xanthoproteic test detects amino acids containing aromatic radicals. According to sources, aromatic amino acids include:

  • Tryptophan — contains an aromatic ring.
  • Phenylalanine — contains an aromatic ring.
  • Tyrosine — contains an aromatic ring.

The mechanism of the reaction consists in the nitration of the aromatic rings of these residues upon interaction with nitric acid, which yields yellow products.

What is the isoelectric point of a protein?

The isoelectric point (pI or IEP) is the pH value of the medium at which a protein molecule is electroneutral and its net charge is zero. In this state, the number of positively and negatively charged groups is equal. At this pH value, the protein exhibits specific properties:

  • Solubility — minimal.
  • Swelling — minimal (hydration is minimized).
  • Salting-out — maximal.

During electrophoresis at the isoelectric point, the protein remains stationary.

Which levels of protein structural organization are destroyed during denaturation?

During denaturation, the secondary, tertiary, and quaternary structures of the protein molecule are destroyed. There is a disruption of the native spatial conformation due to the rupture of weak bonds (hydrogen, hydrophobic, ionic) that stabilize it. At the same time, the primary structure of the protein is preserved, as the peptide bonds between amino acids are not broken. If the primary structure is destroyed (breaking the chain itself), the process becomes irreversible.

How to memorize

Biuret test — for the peptide bond (B-P), Xanthoproteic test — for aromatic rings (leaves a yellow trace, like a nitric acid burn).

Class and exam questions

What determines the ability of a protein to dissolve in water?

From the number of hydrophilic (polar) radicals located on the outer surface of the protein globule or fibril.

Why do enzymes stop working at temperatures above 50 °C?

Due to thermal exposure, denaturation occurs: tertiary and quaternary structures of the molecule are rearranged, which strips the enzyme of activity.

Which reaction proves the presence of peptide bonds?

Biuret reaction with copper salts in an alkaline medium, which gives a characteristic violet coloration.

Why are heavy metal salts so toxic?

They bind to sulfur atoms within proteins, irreversibly changing the properties of the molecule and blocking its biological functions.

Confused about something? Ask the AIThe AI tutor has read the material on "Physicochemical Properties of Proteins" and will explain it in simple terms.

What else to study on this topic

  • Mechanism of protein precipitation during salting-out
  • Processes of self-regulation and allosteric enzyme inhibition
  • Structural features and insolubility of keratin
  • Chemistry of the xanthoproteic reaction for aromatic amino acids

Master the entire topic in the "Chemistry" course

This is a summary. The course covers everything tested in classes and exams.

  • Complete study guide on the topic «Physicochemical Properties of Proteins» and 3,009 more pages of the subject
  • Assignments and quizzes after every topic — just like in a colloquium
  • AI tutor answers questions on the topic anytime
  • 95 video lessons for the subject

Other topics in "Chapter 18. Major Classes of Bioorganic Compounds"

The entire section "Chapter 18. Major Classes of Bioorganic Compounds"

Prepared by WhiteCoat Pro faculty in accordance with the medical school curriculum. For educational purposes only.