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Biology · Epigenetics and evolution

Epigenetics and Ontogenesis

Epigenetics studies changes in gene expression that do not alter the DNA sequence itself, but can be inherited. During ontogenesis, these mechanisms allow the organism to adapt to environmental conditions by forming specific phenotypic traits.

The Essence of EpigeneticsChanges in gene activity without altering DNA structure.
MechanismsDNA methylation and histone modification.
Environmental ImpactEpigenetic marks change under the influence of external factors.
MorphosesNon-heritable phenotypic changes caused by extreme factors.
3 min readFor medical studentsUpdated 09/24/2026
Material prepared by WhiteCoat Pro editorial team based on platform study guidesReviewed by medical editor: Aulov A. A., general practitioner · 09/24/2026

Epigenetic Mechanism of Evolution

Epigenetics explains how organisms can alter their traits without affecting the primary DNA structure. The main tools of this process are DNA methylation and histone modification (the proteins around which DNA is wound).

These molecular changes regulate gene expression by "turning them on" or "turning them off." Importantly, such adjustments arise in response to environmental factors. Sometimes epigenetic marks can be transmitted to a number of successive generations. This creates phenotypic variability, which serves as the material for natural selection. In evolutionary biology, such processes are associated with the Baldwin effect and genetic assimilation, where acquired adaptations become fixed in the genome over time.

Morphoses: Impact of Extreme Environment

During individual development (ontogenesis), there are critical periods when the organism is particularly vulnerable. If extreme environmental factors (such as chemical agents or X-ray radiation) act on it during this time, morphoses may occur.

Morphoses are non-heritable phenotypic changes (modifications). Externally, they can be very similar to mutations, which is why they are often called phenocopies. The difference is that in a morphose, the genetic apparatus remains unchanged; only the realization of genetic information changes under specific conditions.

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Inheritance of Morphoses

The key rule is: morphoses themselves are not inherited. If an organism developed a morphose due to radiation exposure, its offspring will not be born with this trait (provided they are not irradiated).

Only the norm of reaction is inherited—the genetically predetermined ability of an organism to respond to environmental changes in a specific way. That is, the boundaries within which the phenotype can change under the pressure of external factors are transmitted.

Briefly: answers to topical questions

Which specific enzymes carry out DNA methylation during ontogenesis?

The process of DNA methylation is carried out by DNA methyltransferase enzymes. They add methyl groups to specific regions of DNA, usually at cytosine followed by guanine (CpG sites). Specific MeCP proteins bind to methylated nucleotides, recruiting repressor complexes to promoter regions. As a result, gene expression is suppressed without changing its sequence.

Which extreme environmental factors are capable of causing morphoses?

Morphoses can be caused by extreme environmental factors such as X-ray irradiation and chemical agents. These stress exposures lead to organismal modifications if they act during critical periods of ontogenesis. The resulting non-heritable phenotypic changes are not passed on to subsequent generations (only the norm of reaction is inherited), while the new traits themselves often mimic mutations, representing phenocopies.

During which exact critical periods of ontogenesis is the organism most vulnerable to the development of morphoses?

The organism is most vulnerable to extreme environmental factors during embryogenesis (weeks 1–8), which is the period of organogenesis. The following periods of maximum sensitivity are distinguished in intrauterine development:

  • First critical period — the end of the 1st week and the entire 2nd week of gestation.
  • Second critical period — weeks 3–6 of gestation (the stage of active organ differentiation).
  • Period of placentation.

It is during these timeframes that the developing embryo is prone to the development of non-heritable changes and anomalies.

What is the Baldwin effect and the mechanism of genetic assimilation?

The Baldwin effect consists of the fixation of adaptations through a change in selection pressure, which can occur as a result of an initial behavioral shift. Genetic assimilation is the process by which an initially non-heritable adaptive morphose acquires a genetic basis. The mechanism includes the following features:

  • Polygenicity — genetic changes affect multiple loci and can involve any chromosomes.
  • Trait transformation — the initial phenocopy becomes a genocopy.

As a result, the assimilated trait is realized during ontogenesis regardless of external conditions.

Class and exam questions

Does DNA change during epigenetic processes?

No, the primary nucleotide sequence in DNA remains unchanged. Only gene activity (expression) changes due to chemical marks.

Are morphoses passed on to offspring?

No, morphoses are a form of modification variability and are not inherited. Only the organism's norm of reaction to the environment is inherited.

What is a phenocopy?

This is a non-heritable phenotypic change (morphose) that externally copies the manifestation of a specific genetic mutation.

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What else to study on this topic

  • Mechanisms of DNA Methylation
  • Types of Histone Modifications
  • The Baldwin Effect in Evolution
  • The Concept of Genetic Assimilation
  • Critical Periods of Ontogenesis

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